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  5. Bradi1g77060

Bradi1g77060


Description : plastid ribosomal protein l11


Gene families : OG_42_0006605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g77060
Cluster HCCA clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
A4A49_31578 No alias 50s ribosomal protein l11, chloroplastic 0.03 Orthogroups_2024-Update
Brara.I02689.1 No alias component *(uL11c) of large plastid ribosomal-subunit proteome 0.11 Orthogroups_2024-Update
Cre10.g423650 No alias plastid ribosomal protein l11 0.07 Orthogroups_2024-Update
GRMZM2G176820 No alias plastid ribosomal protein l11 0.07 Orthogroups_2024-Update
HORVU4Hr1G084830.2 No alias component *(uL11c) of large plastid ribosomal-subunit proteome 0.2 Orthogroups_2024-Update
Kfl00092_0090 kfl00092_0090_v1.1 (at1g32990 : 190.0) mutant has Decreased effective... 0.05 Orthogroups_2024-Update
LOC_Os03g03020 No alias L11 domain containing ribosomal protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G450800 No alias plastid ribosomal protein l11 0.06 Orthogroups_2024-Update
Potri.011G150700 No alias plastid ribosomal protein l11 0.02 Orthogroups_2024-Update
Pp1s141_43V6 No alias ribosomal protein l11 0.05 Orthogroups_2024-Update
Pp1s46_69V6 No alias ribosomal protein l11 0.02 Orthogroups_2024-Update
Seita.6G237800.1 No alias component *(uL11c) of large plastid ribosomal-subunit proteome 0.02 Orthogroups_2024-Update
Seita.9G561900.1 No alias component *(uL11c) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Sobic.001G527100.1 No alias component *(uL11c) of large plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Sopen08g031560 No alias Ribosomal protein L11, N-terminal domain 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR020783 Ribosomal_L11_C 132 200
IPR020784 Ribosomal_L11_N 63 127
No external refs found!