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  5. Bradi1g77760

Bradi1g77760


Description : nucleic acid binding;zinc ion binding;DNA binding


Gene families : OG_42_0000694 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g77760
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
A4A49_34864 No alias zinc finger ccch domain-containing protein 19 0.02 Orthogroups_2024-Update
At3g51120 No alias DNA binding;zinc ion binding;nucleic acid... 0.05 Orthogroups_2024-Update
Bradi3g30620 No alias nucleic acid binding;zinc ion binding;DNA binding 0.03 Orthogroups_2024-Update
GRMZM2G393471 No alias nucleic acid binding;zinc ion binding;DNA binding 0.03 Orthogroups_2024-Update
GRMZM2G443814 No alias DNA binding;zinc ion binding;nucleic acid... 0.04 Orthogroups_2024-Update
Glyma.04G008500 No alias nucleic acid binding;zinc ion binding;DNA binding 0.02 Orthogroups_2024-Update
Glyma.06G008300 No alias nucleic acid binding;zinc ion binding;DNA binding 0.05 Orthogroups_2024-Update
Glyma.11G074600 No alias DNA binding;zinc ion binding;nucleic acid... 0.05 Orthogroups_2024-Update
LOC_Os03g02160 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.03 Orthogroups_2024-Update
Potri.004G161700 No alias nucleic acid binding;zinc ion binding;DNA binding 0.02 Orthogroups_2024-Update
Seita.9G570500.1 No alias protein factor (NERD) of non-canonical RdDM pathway 0.04 Orthogroups_2024-Update
Sobic.001G534700.1 No alias protein factor (NERD) of non-canonical RdDM pathway 0.05 Orthogroups_2024-Update
Sobic.003G293200.1 No alias protein factor (NERD) of non-canonical RdDM pathway 0.03 Orthogroups_2024-Update
Solyc01g103340 No alias Zinc finger CCCH domain-containing protein 44 (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005665 RNA polymerase II, core complex IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003169 GYF 791 827
IPR003121 SWIB_MDM2_domain 358 431
IPR004343 Plus-3_dom 496 598
No external refs found!