Bradi1g78440

Description : SNF2 domain-containing protein / helicase domain-containing protein

Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi1g78440

Target	Alias	Description	ECC score	Gene Family Method
AC235535.1_FG001	No alias	chromatin-remodeling protein 11	0.06	Orthogroups_2024-Update
At3g06400	No alias	Chromatin-remodeling complex ATPase...	0.04	Orthogroups_2024-Update
At5g18620	No alias	Chromatin-remodeling complex ATPase...	0.02	Orthogroups_2024-Update
At5g44800	No alias	PKR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UKW2]	0.02	Orthogroups_2024-Update
Bradi2g12950	No alias	chromatin-remodeling protein 11	0.02	Orthogroups_2024-Update
Brara.A03677.1	No alias	SMARCA component *(SYD/BRM/MINU)	0.04	Orthogroups_2024-Update
GRMZM2G316191	No alias	chromatin remodeling 4	0.04	Orthogroups_2024-Update
GRMZM2G387890	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
Glyma.02G281000	No alias	chromatin remodeling 5	0.03	Orthogroups_2024-Update
Glyma.04G062400	No alias	chromatin remodeling factor CHD3 (PICKLE)	0.02	Orthogroups_2024-Update
Glyma.05G131500	No alias	chromatin remodeling 4	0.02	Orthogroups_2024-Update
Glyma.13G215900	No alias	chromatin-remodeling protein 11	0.05	Orthogroups_2024-Update
Glyma.14G033600	No alias	chromatin remodeling 5	0.03	Orthogroups_2024-Update
Glyma.15G097000	No alias	chromatin remodeling factor17	0.04	Orthogroups_2024-Update
HORVU2Hr1G022450.1	No alias	component *(CHR5) of SAGA transcription co-activator...	0.05	Orthogroups_2024-Update
Kfl00590_0040	kfl00590_0040_v1.1	(at2g28290 : 922.0) Encodes a SWI2/SNF2-like protein in...	0.02	Orthogroups_2024-Update
LOC_Os05g05780	No alias	chromatin-remodeling complex ATPase chain, putative, expressed	0.02	Orthogroups_2024-Update
Potri.008G205600	No alias	chromatin remodeling factor17	0.03	Orthogroups_2024-Update
Potri.010G020700	No alias	Function unknown	0.06	Orthogroups_2024-Update
Seita.2G419600.1	No alias	component *(CHR5) of SAGA transcription co-activator...	0.03	Orthogroups_2024-Update
Seita.3G058900.1	No alias	SMARCA component *(SYD/BRM/MINU)	0.02	Orthogroups_2024-Update
Sobic.010G065300.1	No alias	CHD3-type chromatin remodeling factor *(PKL/PKR)	0.03	Orthogroups_2024-Update
Solyc08g029130	No alias	chromatin remodeling factor CHD3 (PICKLE) (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
evm.model.tig00000350.9	No alias	(at2g25170 : 212.0) Encodes a SWI/SWF nuclear-localized...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	73	355
IPR001650	Helicase_C	379	500

External Links

No external refs found!

Bradi1g78440

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation