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  5. Bradi1g78470

Bradi1g78470


Description : Coatomer, alpha subunit


Gene families : OG_42_0002646 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g78470
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Brara.H01794.1 No alias subunit alpha of coat protein complex 0.05 Orthogroups_2024-Update
Cre13.g565850 No alias Coatomer, alpha subunit 0.08 Orthogroups_2024-Update
Glyma.04G255100 No alias Coatomer, alpha subunit 0.03 Orthogroups_2024-Update
Glyma.10G199300 No alias Coatomer, alpha subunit 0.03 Orthogroups_2024-Update
Glyma.11G113000 No alias Coatomer, alpha subunit 0.03 Orthogroups_2024-Update
Glyma.12G038900 No alias Coatomer, alpha subunit 0.04 Orthogroups_2024-Update
Glyma.20G190900 No alias Coatomer, alpha subunit 0.05 Orthogroups_2024-Update
HORVU4Hr1G088390.1 No alias subunit alpha of coat protein complex 0.05 Orthogroups_2024-Update
Kfl00045_0430 kfl00045_0430_v1.1 (at1g62020 : 1226.0) Coatomer, alpha subunit; FUNCTIONS... 0.02 Orthogroups_2024-Update
MA_10428405g0010 No alias (at1g62020 : 1734.0) Coatomer, alpha subunit; FUNCTIONS... 0.02 Orthogroups_2024-Update
Mp3g00050.1 No alias subunit alpha of coat protein complex 0.03 Orthogroups_2024-Update
PSME_00024193-RA No alias (at1g62020 : 1949.0) Coatomer, alpha subunit; FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00051512-RA No alias (at1g62020 : 1810.0) Coatomer, alpha subunit; FUNCTIONS... 0.04 Orthogroups_2024-Update
Pp1s135_34V6 No alias coatomer alpha 0.07 Orthogroups_2024-Update
Pp1s86_189V6 No alias coatomer alpha 0.04 Orthogroups_2024-Update
Seita.5G140600.1 No alias subunit alpha of coat protein complex 0.05 Orthogroups_2024-Update
Seita.9G119500.1 No alias subunit alpha of coat protein complex 0.06 Orthogroups_2024-Update
Sobic.001G117800.1 No alias subunit alpha of coat protein complex 0.07 Orthogroups_2024-Update
Sobic.003G029600.1 No alias subunit alpha of coat protein complex 0.07 Orthogroups_2024-Update
Solyc07g032100 No alias Coatomer subunit alpha (AHRD V3.3 *** K4CDF4_SOLLC) 0.07 Orthogroups_2024-Update
Sopen04g034590 No alias Coatomer (COPI) alpha subunit C-terminus 0.04 Orthogroups_2024-Update
Sopen07g015440 No alias Coatomer (COPI) alpha subunit C-terminus 0.04 Orthogroups_2024-Update
evm.model.contig_3512.2 No alias (at1g62020 : 1115.0) Coatomer, alpha subunit; FUNCTIONS... 0.02 Orthogroups_2024-Update
evm.model.tig00000144.152 No alias (at1g62020 : 592.0) Coatomer, alpha subunit; FUNCTIONS... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
CC GO:0030126 COPI vesicle coat IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 84 121
IPR001680 WD40_repeat 126 163
IPR001680 WD40_repeat 44 79
IPR001680 WD40_repeat 241 276
IPR001680 WD40_repeat 198 231
IPR010714 Coatomer_asu_C 815 1218
IPR006692 Coatomer_WD-assoc_reg 347 768
No external refs found!