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  5. Sopen06g028730

Sopen06g028730


Description : Zinc finger, C2H2 type


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g028730
Cluster HCCA clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
9109 No alias indeterminate(ID)-domain 14 0.03 Orthogroups_2024-Update
At1g68130 No alias Protein indeterminate-domain 14... 0.03 Orthogroups_2024-Update
At2g02070 No alias Protein indeterminate-domain 5, chloroplastic... 0.03 Orthogroups_2024-Update
GRMZM2G123094 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.02G144400 No alias indeterminate(ID)-domain 12 0.02 Orthogroups_2024-Update
Glyma.08G192300 No alias indeterminate(ID)-domain 11 0.05 Orthogroups_2024-Update
Glyma.09G170200 No alias indeterminate(ID)-domain 16 0.04 Orthogroups_2024-Update
Glyma.10G280000 No alias indeterminate(ID)-domain 5 0.04 Orthogroups_2024-Update
Glyma.20G005900 No alias indeterminate(ID)-domain 5 0.03 Orthogroups_2024-Update
LOC_Os01g14010 No alias ZOS1-05 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
PSME_00054281-RA No alias (at1g03840 : 248.0) MGP is a nuclear-localized putative... 0.04 Orthogroups_2024-Update
Solyc01g005060 No alias Zinc finger family protein (AHRD V3.3 *** B9HJL4_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!