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  5. Sopen06g028910

Sopen06g028910


Description : Domain of unknown function (DUF588)


Gene families : OG_42_0000213 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g028910
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
A4A49_03550 No alias casparian strip membrane protein 1 0.04 Orthogroups_2024-Update
A4A49_10250 No alias casp-like protein 1f1 0.02 Orthogroups_2024-Update
A4A49_12663 No alias casparian strip membrane protein 2 0.03 Orthogroups_2024-Update
At2g36100 No alias Casparian strip membrane protein 1... 0.03 Orthogroups_2024-Update
Brara.C04446.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.D02195.1 No alias lignin polymerization scaffold protein *(CASP) 0.02 Orthogroups_2024-Update
GRMZM2G035444 No alias Uncharacterised protein family (UPF0497) 0.02 Orthogroups_2024-Update
Glyma.07G196300 No alias Uncharacterised protein family (UPF0497) 0.02 Orthogroups_2024-Update
Glyma.07G251200 No alias Uncharacterised protein family (UPF0497) 0.08 Orthogroups_2024-Update
Glyma.15G191800 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Glyma.17G023100 No alias Uncharacterised protein family (UPF0497) 0.07 Orthogroups_2024-Update
Mp3g16500.1 No alias CASP-like protein 1U1 OS=Marchantia polymorpha... 0.02 Orthogroups_2024-Update
Potri.004G043300 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Potri.006G208800 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Potri.012G104300 No alias Uncharacterised protein family (UPF0497) 0.02 Orthogroups_2024-Update
Solyc01g067330 No alias CASP-like protein (AHRD V3.3 *** K4AWY2_SOLLC) 0.06 Orthogroups_2024-Update
Solyc03g097730 No alias CASP-like protein (AHRD V3.3 *** K4BJJ0_SOLLC) 0.03 Orthogroups_2024-Update
Solyc04g005620 No alias CASP-like protein (AHRD V3.3 *** K4BNG8_SOLLC) 0.03 Orthogroups_2024-Update
Solyc06g072550 No alias CASP-like protein (AHRD V3.3 *** K4C8X5_SOLLC) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006702 CASP_dom 20 161
No external refs found!