1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi2g02730

Bradi2g02730


Description : AAA-type ATPase family protein


Gene families : OG_42_0002387 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g02730
Cluster HCCA clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G010300.1 No alias ATPase component *(VPS4/SKD1) of VPS4-VTA1... 0.03 Orthogroups_2024-Update
Kfl00370_0090 kfl00370_0090_v1.1 (at2g27600 : 648.0) Encodes a SKD1 (Suppressor of K+... 0.02 Orthogroups_2024-Update
Mp8g01610.1 No alias ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.02 Orthogroups_2024-Update
PSME_00005563-RA No alias (at2g27600 : 333.0) Encodes a SKD1 (Suppressor of K+... 0.02 Orthogroups_2024-Update
Potri.009G144300 No alias AAA-type ATPase family protein 0.02 Orthogroups_2024-Update
Sobic.003G077900.1 No alias ATPase component *(VPS4/SKD1) of VPS4-VTA1... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR007330 MIT 7 70
IPR015415 Vps4_C 371 435
IPR003959 ATPase_AAA_core 172 301
No external refs found!