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  5. Bradi2g04000

Bradi2g04000


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g04000
Cluster HCCA clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
At1g77640 No alias Ethylene-responsive transcription factor ERF013... 0.04 Orthogroups_2024-Update
At2g25820 No alias Ethylene-responsive transcription factor ERF042... 0.02 Orthogroups_2024-Update
At5g47230 No alias ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9] 0.02 Orthogroups_2024-Update
Bradi2g29960 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g49810 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Brara.B01799.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Brara.C01398.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Brara.F02347.1 No alias subgroup ERF-X transcription factor 0.04 Orthogroups_2024-Update
Brara.F02721.1 No alias subgroup ERF-V transcription factor 0.02 Orthogroups_2024-Update
Brara.I02949.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G149756 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G063600 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
Glyma.10G119100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G162700 No alias ethylene responsive element binding factor 4 0.03 Orthogroups_2024-Update
Glyma.15G077100 No alias erf domain protein 9 0.02 Orthogroups_2024-Update
Glyma.17G210500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G142000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G070000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os02g43970 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g52090 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g41780 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g41130 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10343854g0010 No alias (at1g74930 : 110.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_115348g0020 No alias (at4g17500 : 116.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
MA_201698g0010 No alias (at5g11590 : 124.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_2040g0010 No alias (at5g65130 : 90.5) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_67841g0010 No alias (at2g44940 : 151.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00005187-RA No alias (at4g17500 : 144.0) Encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00008891-RA No alias (at4g17500 : 93.6) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00008897-RA No alias (at4g17500 : 88.2) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00012644-RA No alias (at4g17500 : 84.3) Encodes a member of the ERF (ethylene... 0.04 Orthogroups_2024-Update
PSME_00016017-RA No alias (at5g25190 : 150.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
Potri.001G094800 No alias cytokinin response factor 2 0.02 Orthogroups_2024-Update
Potri.003G162500 No alias related to AP2 6l 0.02 Orthogroups_2024-Update
Potri.005G223200 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Potri.013G045200 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Seita.1G271000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.1G351800.1 No alias subgroup ERF-V transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G002500.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G415600.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Solyc06g066540 No alias Ethylene-responsive transcription factor TINY (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc07g053740 No alias Ethylene Response Factor F.4 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 76 126
No external refs found!