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Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi2g04723 | |
| Cluster | HCCA clusters: Cluster_214 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 128850 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| At2g01510 | No alias | Pentatricopeptide repeat-containing protein At2g01510,... | 0.03 | Orthogroups_2024-Update | |
| At2g39620 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g14160 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi1g72290 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Bradi3g36470 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Bradi3g40131 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.A00314.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.E03135.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.F03378.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G111780 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.02G160400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G035330.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU3Hr1G079860.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU4Hr1G032070.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU4Hr1G064880.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU5Hr1G047290.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
| HORVU7Hr1G038460.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g72930 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os04g43430 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_724726g0010 | No alias | (at1g11290 : 611.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| MA_9360929g0010 | No alias | (at4g13650 : 669.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00001133-RA | No alias | (at2g03880 : 550.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00003567-RA | No alias | (at4g13650 : 593.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
| PSME_00008509-RA | No alias | (at1g11290 : 604.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00029481-RA | No alias | (at4g18750 : 670.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00056153-RA | No alias | (at2g13600 : 519.0) Pentatricopeptide repeat (PPR)... | 0.05 | Orthogroups_2024-Update | |
| Seita.1G205700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.1G290500.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Seita.2G031700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.2G293300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.4G225800.1 | No alias | Unknown function | 0.1 | Orthogroups_2024-Update | |
| Seita.5G055200.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Seita.5G124400.1 | No alias | RNA editing factor *(OTP81) | 0.03 | Orthogroups_2024-Update | |
| Seita.5G302500.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Seita.8G017200.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.8G163400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.9G489500.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.001G282300.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.001G347100.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G436600.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G240900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G292300.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G385200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G030100.1 | No alias | RNA editing factor *(CWM1) | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G398900.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G053100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G141600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G174800.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G290400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.005G210700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.008G009000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G136200.1 | No alias | RNA editing factor *(MEF32) | 0.02 | Orthogroups_2024-Update | |
| Sobic.010G066900.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.010G067000.1 | No alias | RNA editing factor *(MEF29) | 0.04 | Orthogroups_2024-Update | |
| Sopen02g015160 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
| Sopen07g003070 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
| Sopen11g017250 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0005507 | copper ion binding | IEP | Predicted GO |
| CC | GO:0009521 | photosystem | IEP | Predicted GO |
| CC | GO:0009523 | photosystem II | IEP | Predicted GO |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
| BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| CC | GO:1990204 | oxidoreductase complex | IEP | Predicted GO |
| No external refs found! |