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  5. Bradi2g05950

Bradi2g05950


Description : basic helix-loop-helix (bHLH) DNA-binding family protein


Gene families : OG_42_0002013 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g05950
Cluster HCCA clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
A4A49_26237 No alias hypothetical protein 0.03 Orthogroups_2024-Update
PSME_00039285-RA No alias (at5g56960 : 82.0) basic helix-loop-helix (bHLH)... 0.02 Orthogroups_2024-Update
Potri.006G148800 No alias basic helix-loop-helix (bHLH) DNA-binding family protein 0.03 Orthogroups_2024-Update
Sobic.003G031100.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G073500.1 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.009G073800.2 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 245 290
No external refs found!