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  5. Bradi2g06080

Bradi2g06080


Description : Ribosomal protein S5 family protein


Gene families : OG_42_0006823 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006823_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g06080
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
A4A49_19809 No alias 30s ribosomal protein s5, chloroplastic 0.03 Orthogroups_2024-Update
Brara.D02059.1 No alias component *(uS5c) of small plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Cre16.g659950 No alias Ribosomal protein S5 family protein 0.04 Orthogroups_2024-Update
Glyma.07G198500 No alias Ribosomal protein S5 family protein 0.03 Orthogroups_2024-Update
Glyma.13G177900 No alias Ribosomal protein S5 family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G038570.1 No alias component *(uS5c) of small plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Kfl00419_0080 kfl00419_0080_v1.1 (at2g33800 : 169.0) Ribosomal protein S5 family protein;... 0.02 Orthogroups_2024-Update
Mp8g10330.1 No alias component psRPS5 of small ribosomal subunit proteome 0.04 Orthogroups_2024-Update
Potri.004G045700 No alias Ribosomal protein S5 family protein 0.07 Orthogroups_2024-Update
Pp1s2_598V6 No alias ribosomal protein s5 0.04 Orthogroups_2024-Update
Pp1s45_164V6 No alias 30s ribosomal protein s5 0.09 Orthogroups_2024-Update
Pp1s61_236V6 No alias 30s ribosomal protein s5 0.07 Orthogroups_2024-Update
Seita.9G187900.1 No alias component *(uS5c) of small plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Sobic.001G191000.1 No alias component *(uS5c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Sopen02g022830 No alias Ribosomal protein S5, C-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 168 232
IPR005324 Ribosomal_S5_C 246 315
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