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Description : RNA binding (RRM/RBD/RNP motifs) family protein
Gene families : OG_42_0002171 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002171_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi2g06660 | |
| Cluster | HCCA clusters: Cluster_216 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Glyma.10G048700 | No alias | RNA binding (RRM/RBD/RNP motifs) family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G136500 | No alias | RNA binding (RRM/RBD/RNP motifs) family protein | 0.02 | Orthogroups_2024-Update | |
| Potri.009G026200 | No alias | RNA binding (RRM/RBD/RNP motifs) family protein | 0.03 | Orthogroups_2024-Update | |
| Seita.5G147300.1 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex | 0.05 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Predicted GO |
| MF | GO:0003993 | acid phosphatase activity | IEP | Predicted GO |
| MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
| MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
| MF | GO:0005215 | transporter activity | IEP | Predicted GO |
| MF | GO:0005524 | ATP binding | IEP | Predicted GO |
| CC | GO:0005575 | cellular_component | IEP | Predicted GO |
| BP | GO:0006260 | DNA replication | IEP | Predicted GO |
| BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
| BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Predicted GO |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0006810 | transport | IEP | Predicted GO |
| MF | GO:0008144 | drug binding | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| MF | GO:0015267 | channel activity | IEP | Predicted GO |
| CC | GO:0016020 | membrane | IEP | Predicted GO |
| MF | GO:0016301 | kinase activity | IEP | Predicted GO |
| BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
| MF | GO:0016740 | transferase activity | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predicted GO |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
| MF | GO:0016791 | phosphatase activity | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| BP | GO:0036211 | protein modification process | IEP | Predicted GO |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0051179 | localization | IEP | Predicted GO |
| BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
| BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |