Sopen06g029610

Description : EF hand

Gene families : OG_42_0000821 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g029610
Cluster	HCCA clusters: Cluster_208

Target	Alias	Description	ECC score	Gene Family Method
A4A49_27262	No alias	calmodulin-like protein 3	0.03	Orthogroups_2024-Update
A4A49_31895	No alias	calmodulin-like protein 3	0.03	Orthogroups_2024-Update
At2g43290	No alias	MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]	0.03	Orthogroups_2024-Update
Glyma.15G030100	No alias	Calcium-binding EF-hand family protein	0.03	Orthogroups_2024-Update
Glyma.17G112000	No alias	Calcium-binding EF-hand family protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	73	134
IPR002048	EF_hand_dom	144	210

External Links

No external refs found!