Description : RING/U-box superfamily protein
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi2g06880 | |
Cluster | HCCA clusters: Cluster_19 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_19370 | No alias | ring-h2 finger protein atl70 | 0.01 | Orthogroups_2024-Update | |
At4g09100 | No alias | RING-H2 finger protein ATL39... | 0.02 | Orthogroups_2024-Update | |
Bradi3g32700 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.C03353.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Brara.E02690.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Brara.E03386.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
GRMZM2G171277 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.01G017300 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.03G203400 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
Glyma.10G289100 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
HORVU0Hr1G021450.9 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G096480.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G080020.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G121570.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
MA_904294g0010 | No alias | (at1g72310 : 107.0) Encodes a putative RING-H2 zinc... | 0.03 | Orthogroups_2024-Update | |
PSME_00051567-RA | No alias | (at3g16720 : 108.0) RING-H2 protein induced after... | 0.01 | Orthogroups_2024-Update | |
PSME_00054098-RA | No alias | (at3g16720 : 124.0) RING-H2 protein induced after... | 0.02 | Orthogroups_2024-Update | |
Potri.003G093100 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.006G144200 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.007G057300 | No alias | RING-H2 finger A3A | 0.03 | Orthogroups_2024-Update | |
Pp1s185_137V6 | No alias | zinc finger | 0.02 | Orthogroups_2024-Update | |
Pp1s185_21V6 | No alias | zinc finger (c3hc4-type ring finger) family protein | 0.02 | Orthogroups_2024-Update | |
Pp1s257_3V6 | No alias | ac009177_16 ring-h2 zinc finger protein atl6 | 0.02 | Orthogroups_2024-Update | |
Seita.1G203900.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Seita.1G279400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Seita.1G306500.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.1G379200.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Seita.3G209600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.5G149000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Sobic.003G147301.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.004G181300.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.004G187800.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.005G226700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.009G205400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Sobic.010G071000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Solyc11g007530 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** A0A061DVK5_THECC) | 0.02 | Orthogroups_2024-Update | |
Solyc11g066510 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 122 | 165 |
No external refs found! |