Sopen06g029900

Description : Piwi domain

Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g029900
Cluster	HCCA clusters: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
Glyma.20G151400	No alias	Stabilizer of iron transporter SufD / Polynucleotidyl transferase	0.04	Orthogroups_2024-Update
Potri.006G025900	No alias	Argonaute family protein	0.02	Orthogroups_2024-Update
Potri.014G159400	No alias	Argonaute family protein	0.02	Orthogroups_2024-Update
Potri.015G029000	No alias	Stabilizer of iron transporter SufD / Polynucleotidyl transferase	0.04	Orthogroups_2024-Update
Seita.7G201100.1	No alias	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.03	Orthogroups_2024-Update
Seita.9G019800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032474	Argonaute_N	52	217
IPR003165	Piwi	567	873
IPR032473	Argonaute_Mid_dom	478	556
IPR014811	ArgoL1	229	277
IPR003100	PAZ_dom	284	413
IPR032472	ArgoL2	423	468

External Links

No external refs found!