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  5. Bradi2g09720

Bradi2g09720


Description : cycling DOF factor 2


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g09720
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
29563 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
29617 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
89924 No alias cycling DOF factor 1 0.03 Orthogroups_2024-Update
A4A49_00536 No alias dof zinc finger protein dof5.7 0.03 Orthogroups_2024-Update
A4A49_12086 No alias cyclic dof factor 2 0.02 Orthogroups_2024-Update
A4A49_13356 No alias cyclic dof factor 3 0.03 Orthogroups_2024-Update
A4A49_33562 No alias dof zinc finger protein dof4.6 0.02 Orthogroups_2024-Update
A4A49_34579 No alias dof zinc finger protein pbf 0.03 Orthogroups_2024-Update
A4A49_35213 No alias dof zinc finger protein dof1.7 0.02 Orthogroups_2024-Update
A4A49_41416 No alias dof zinc finger protein dof1.4 0.02 Orthogroups_2024-Update
AC155434.2_FG006 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
At1g26790 No alias Dof-type zinc finger DNA-binding family protein... 0.04 Orthogroups_2024-Update
At1g64620 No alias Dof zinc finger protein DOF1.8... 0.02 Orthogroups_2024-Update
At1g69570 No alias Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3] 0.02 Orthogroups_2024-Update
At3g47500 No alias Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3] 0.03 Orthogroups_2024-Update
At3g50410 No alias OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5] 0.02 Orthogroups_2024-Update
At5g39660 No alias Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5] 0.04 Orthogroups_2024-Update
At5g60850 No alias OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84] 0.04 Orthogroups_2024-Update
At5g62430 No alias Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3] 0.05 Orthogroups_2024-Update
Brara.A01411.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.F02115.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Brara.F02426.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.G01458.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.G02475.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.G02891.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.H02152.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Brara.I00633.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.I03146.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G089949 No alias cycling DOF factor 2 0.04 Orthogroups_2024-Update
GRMZM2G146283 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
Glyma.02G108600 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.04G168300 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.05G018100 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Glyma.06G124300 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.07G229600 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.08G358100 No alias DNA binding with one finger 2.4 0.02 Orthogroups_2024-Update
Glyma.09G237000 No alias cycling DOF factor 2 0.04 Orthogroups_2024-Update
Glyma.11G151497 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.13G062500 No alias cycling DOF factor 2 0.05 Orthogroups_2024-Update
Glyma.13G241900 No alias Dof-type zinc finger DNA-binding family protein 0.07 Orthogroups_2024-Update
Glyma.15G071400 No alias Dof-type zinc finger DNA-binding family protein 0.05 Orthogroups_2024-Update
Glyma.18G260500 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
Glyma.19G023200 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.20G035200 No alias cycling DOF factor 2 0.04 Orthogroups_2024-Update
HORVU1Hr1G005390.2 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU2Hr1G017290.1 No alias transcription factor *(DOF) 0.06 Orthogroups_2024-Update
HORVU2Hr1G119110.4 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
HORVU4Hr1G074990.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU5Hr1G021290.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
HORVU6Hr1G065250.4 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
LOC_Os01g15900 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os07g48570 No alias expressed protein 0.04 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00004776-RA No alias (at5g60850 : 127.0) Encodes a zinc finger protein.; OBF... 0.03 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
PSME_00041316-RA No alias (at5g39660 : 139.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Potri.003G034200 No alias DOF zinc finger protein 1 0.03 Orthogroups_2024-Update
Potri.004G121800 No alias cycling DOF factor 2 0.05 Orthogroups_2024-Update
Potri.011G047500 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Potri.011G055600 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Potri.015G048300 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Potri.017G084600 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
Potri.019G040700 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Pp1s124_139V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Pp1s149_180V6 No alias cycling dof factor 2 0.01 Orthogroups_2024-Update
Pp1s169_171V6 No alias cycling dof factor 2 0.03 Orthogroups_2024-Update
Pp1s170_42V6 No alias f-box family protein 0.01 Orthogroups_2024-Update
Pp1s351_46V6 No alias zinc finger 0.05 Orthogroups_2024-Update
Pp1s385_53V6 No alias ascorbate oxidase promoter-binding protein aobp 0.03 Orthogroups_2024-Update
Seita.1G303300.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.2G436800.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.5G052700.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Seita.5G266800.1 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
Seita.6G192200.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.001G034300.3 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
Sobic.003G121400.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.009G014400.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.03 Orthogroups_2024-Update
Solyc02g077950 No alias Dof zinc finger protein5 0.05 Orthogroups_2024-Update
Solyc02g088070 No alias Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) 0.02 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.03 Orthogroups_2024-Update
Solyc08g082910 No alias Dof zinc finger protein (AHRD V3.3 *** W9RTF5_9ROSA) 0.03 Orthogroups_2024-Update
Sopen02g016410 No alias Dof domain, zinc finger 0.06 Orthogroups_2024-Update
Sopen02g022790 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen03g034940 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen05g003730 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0001505 regulation of neurotransmitter levels IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0004788 thiamine diphosphokinase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006544 glycine metabolic process IEP Predicted GO
BP GO:0006546 glycine catabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009071 serine family amino acid catabolic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0030975 thiamine binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0042133 neurotransmitter metabolic process IEP Predicted GO
BP GO:0042135 neurotransmitter catabolic process IEP Predicted GO
BP GO:0042357 thiamine diphosphate metabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051254 positive regulation of RNA metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 168 224
No external refs found!