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  5. Bradi2g10230

Bradi2g10230


Description : deletion of SUV3 suppressor 1(I)


Gene families : OG_42_0004900 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004900_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g10230
Cluster HCCA clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
At1g64750 No alias Deletion of SUV3 suppressor 1(I)... 0.03 Orthogroups_2024-Update
Sobic.003G150000.1 No alias regulatory component *(DSS1/Sem1) of TREX-2 mRNP... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006406 mRNA export from nucleus IEA InterProScan predictions
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEA InterProScan predictions
BP GO:0043248 proteasome assembly IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR007834 DSS1_SEM1 12 68
No external refs found!