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Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Gene families : OG_42_0001724 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001724_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi2g10400 | |
| Cluster | HCCA clusters: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 19071 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.08 | Orthogroups_2024-Update | |
| A4A49_02333 | No alias | 60s ribosomal protein l30-2 | 0.08 | Orthogroups_2024-Update | |
| A4A49_19973 | No alias | 60s ribosomal protein l30-2 | 0.07 | Orthogroups_2024-Update | |
| A4A49_60378 | No alias | 60s ribosomal protein l30-2 | 0.04 | Orthogroups_2024-Update | |
| At1g77940 | No alias | 60S ribosomal protein L30-2... | 0.05 | Orthogroups_2024-Update | |
| At3g18740 | No alias | 60S ribosomal protein L30-3... | 0.04 | Orthogroups_2024-Update | |
| Brara.A02913.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
| Brara.C03701.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
| Brara.E02321.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.11 | Orthogroups_2024-Update | |
| Brara.G02123.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
| Cre10.g420750 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.06 | Orthogroups_2024-Update | |
| GRMZM2G027728 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G044137 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.02G002300 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.08G257100 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.10G002400 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.07 | Orthogroups_2024-Update | |
| HORVU3Hr1G038950.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Kfl00019_0450 | kfl00019_0450_v1.1 | (o49884|rl30_luplu : 186.0) 60S ribosomal protein L30 -... | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g16890 | No alias | ribosomal protein L7Ae, putative, expressed | 0.06 | Orthogroups_2024-Update | |
| LOC_Os01g59730 | No alias | ribosomal protein L7Ae, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| MA_10431626g0010 | No alias | (o49884|rl30_luplu : 184.0) 60S ribosomal protein L30 -... | 0.04 | Orthogroups_2024-Update | |
| MA_6354g0010 | No alias | (o49884|rl30_luplu : 204.0) 60S ribosomal protein L30 -... | 0.03 | Orthogroups_2024-Update | |
| Mp7g01690.1 | No alias | component RPL30 of LSU proteome component | 0.03 | Orthogroups_2024-Update | |
| PSME_00026808-RA | No alias | (o49884|rl30_luplu : 160.0) 60S ribosomal protein L30 -... | 0.05 | Orthogroups_2024-Update | |
| PSME_00033349-RA | No alias | (o49884|rl30_luplu : 192.0) 60S ribosomal protein L30 -... | 0.05 | Orthogroups_2024-Update | |
| Pp1s106_167V6 | No alias | ribosomal protein l30 | 0.05 | Orthogroups_2024-Update | |
| Pp1s13_391V6 | No alias | ribosomal protein l30 | 0.1 | Orthogroups_2024-Update | |
| Pp1s41_251V6 | No alias | ribosomal protein l30 | 0.08 | Orthogroups_2024-Update | |
| Pp1s91_111V6 | No alias | ribosomal protein l30 | 0.04 | Orthogroups_2024-Update | |
| Seita.3G197300.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
| Seita.5G043000.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
| Sobic.009G179100.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.13 | Orthogroups_2024-Update | |
| Solyc01g009100 | No alias | 60S ribosomal protein L30 (AHRD V3.3 *** RL30_LUPLU) | 0.09 | Orthogroups_2024-Update | |
| Solyc04g072660 | No alias | 60S ribosomal protein L30 (AHRD V3.3 *** RL30_LUPLU) | 0.06 | Orthogroups_2024-Update | |
| Solyc11g071490 | No alias | 60S ribosomal protein L30 (AHRD V3.3 *** RL30_LUPLU) | 0.05 | Orthogroups_2024-Update | |
| Sopen01g004590 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.08 | Orthogroups_2024-Update | |
| Sopen04g028860 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.03 | Orthogroups_2024-Update | |
| Sopen11g029180 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.09 | Orthogroups_2024-Update | |
| evm.model.contig_3502.5 | No alias | (q9sdg6|rl30_orysa : 151.0) 60S ribosomal protein L30 -... | 0.09 | Orthogroups_2024-Update | |
| evm.model.tig00001164.6 | No alias | (o49884|rl30_luplu : 168.0) 60S ribosomal protein L30 -... | 0.09 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
| MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
| MF | GO:0003678 | DNA helicase activity | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| MF | GO:0005525 | GTP binding | IEP | Predicted GO |
| CC | GO:0005575 | cellular_component | IEP | Predicted GO |
| CC | GO:0005622 | intracellular | IEP | Predicted GO |
| CC | GO:0005730 | nucleolus | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 13 | 106 |
| No external refs found! |