Sopen06g030210

Description : Zinc knuckle

Gene families : OG_42_0003400 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003400_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g030210
Cluster	HCCA clusters: Cluster_337

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.20G055200	No alias	zinc knuckle (CCHC-type) family protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	285	301
IPR001878	Znf_CCHC	136	153
IPR001878	Znf_CCHC	178	194

External Links

No external refs found!