Bradi2g11890

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi2g11890

Target	Alias	Description	ECC score	Gene Family Method
AC198403.3_FG001	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
At3g50260	No alias	Ethylene-responsive transcription factor ERF011...	0.02	Orthogroups_2024-Update
Bradi1g57970	No alias	C-repeat/DRE binding factor 2	0.03	Orthogroups_2024-Update
Bradi1g72457	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.J02098.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Brara.J02216.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.J02528.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Glyma.06G290000	No alias	erf domain protein 9	0.04	Orthogroups_2024-Update
Glyma.07G250100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.08G216600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.13G081600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.13G122500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.15G077000	No alias	ERF domain protein 12	0.02	Orthogroups_2024-Update
HORVU0Hr1G016540.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os07g22730	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g11480	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_184464g0010	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_8384767g0010	No alias	(at1g33760 : 124.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
PSME_00050761-RA	No alias	(at1g15360 : 129.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
Potri.001G067600	No alias	related to AP2 6l	0.03	Orthogroups_2024-Update
Potri.002G065600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.006G138800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Pp1s117_32V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Pp1s41_212V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G196400.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.1G271000.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.7G081300.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Seita.7G205200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G295500.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Solyc05g009450	No alias	Solanum lycopersicum Cytokinin Response Factor 10	0.02	Orthogroups_2024-Update
Solyc06g082590	No alias	DNA-binding protein Pti6	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
CC	GO:0030118	clathrin coat	IEP	Predicted GO
CC	GO:0030120	vesicle coat	IEP	Predicted GO
CC	GO:0030125	clathrin vesicle coat	IEP	Predicted GO
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Predicted GO
CC	GO:0030132	clathrin coat of coated pit	IEP	Predicted GO
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Predicted GO
BP	GO:0042546	cell wall biogenesis	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
CC	GO:0044459	plasma membrane part	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
CC	GO:0098797	plasma membrane protein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	49	98

External Links

No external refs found!

Bradi2g11890

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation