Description : glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein
Gene families : OG_42_0000512 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000512_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi2g13740 | |
Cluster | HCCA clusters: Cluster_277 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g36090 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi1g36110 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.15G269400 | No alias | glycoside hydrolase family 28 protein /... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | InterProScan predictions |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 77 | 401 |
No external refs found! |