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Description : Ribonuclease H-like superfamily protein
Gene families : OG_42_0000058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000058_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi2g14745 | |
| Cluster | HCCA clusters: Cluster_185 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g48335 | No alias | Function unknown | 0.04 | Orthogroups_2024-Update | |
| HORVU1Hr1G057810.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU2Hr1G083180.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G073460.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| MA_10427079g0050 | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
| Seita.9G056800.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.008G079700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0001871 | pattern binding | IEP | Predicted GO |
| BP | GO:0003333 | amino acid transmembrane transport | IEP | Predicted GO |
| MF | GO:0003678 | DNA helicase activity | IEP | Predicted GO |
| MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Predicted GO |
| MF | GO:0004386 | helicase activity | IEP | Predicted GO |
| MF | GO:0004519 | endonuclease activity | IEP | Predicted GO |
| MF | GO:0004521 | endoribonuclease activity | IEP | Predicted GO |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Predicted GO |
| MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
| MF | GO:0004556 | alpha-amylase activity | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0006820 | anion transport | IEP | Predicted GO |
| BP | GO:0006865 | amino acid transport | IEP | Predicted GO |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Predicted GO |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| BP | GO:0015711 | organic anion transport | IEP | Predicted GO |
| BP | GO:0015849 | organic acid transport | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016160 | amylase activity | IEP | Predicted GO |
| MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predicted GO |
| BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
| MF | GO:0042623 | ATPase activity, coupled | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Predicted GO |
| BP | GO:0046942 | carboxylic acid transport | IEP | Predicted GO |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Predicted GO |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predicted GO |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Predicted GO |
| BP | GO:0098656 | anion transmembrane transport | IEP | Predicted GO |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Predicted GO |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Predicted GO |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |