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  5. Bradi2g14881

Bradi2g14881


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0002044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g14881
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G031180.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Solyc05g005040 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G26610.1) 0.02 Orthogroups_2024-Update
Sopen05g001180 No alias Glycosyl hydrolases family 28 0.02 Orthogroups_2024-Update
Sopen07g005690 No alias Glycosyl hydrolases family 28 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 35 181
No external refs found!