Bradi2g16050

Description : 3-ketoacyl-CoA synthase 4

Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi2g16050
Cluster	HCCA clusters: Cluster_133

Target	Alias	Description	ECC score	Gene Family Method
443640	No alias	3-ketoacyl-CoA synthase 4	0.02	Orthogroups_2024-Update
A4A49_23496	No alias	3-ketoacyl-coa synthase 2	0.01	Orthogroups_2024-Update
A4A49_29650	No alias	3-ketoacyl-coa synthase 10	0.03	Orthogroups_2024-Update
At5g49070	No alias	Probable 3-ketoacyl-CoA synthase 21...	0.03	Orthogroups_2024-Update
Bradi1g30740	No alias	3-ketoacyl-CoA synthase 6	0.03	Orthogroups_2024-Update
Bradi1g68430	No alias	3-ketoacyl-CoA synthase 1	0.03	Orthogroups_2024-Update
Bradi1g69637	No alias	3-ketoacyl-CoA synthase 6	0.04	Orthogroups_2024-Update
Bradi1g72560	No alias	3-ketoacyl-CoA synthase 10	0.04	Orthogroups_2024-Update
Bradi2g15720	No alias	3-ketoacyl-CoA synthase 11	0.03	Orthogroups_2024-Update
Bradi3g07730	No alias	3-ketoacyl-CoA synthase 11	0.03	Orthogroups_2024-Update
Bradi4g03767	No alias	3-ketoacyl-CoA synthase 6	0.02	Orthogroups_2024-Update
Brara.J02730.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
GRMZM2G031790	No alias	3-ketoacyl-CoA synthase 2	0.01	Orthogroups_2024-Update
GRMZM2G393897	No alias	3-ketoacyl-CoA synthase 4	0.03	Orthogroups_2024-Update
GRMZM2G569948	No alias	3-ketoacyl-CoA synthase 11	0.06	Orthogroups_2024-Update
Glyma.08G261100	No alias	3-ketoacyl-CoA synthase 6	0.04	Orthogroups_2024-Update
Glyma.10G179400	No alias	3-ketoacyl-CoA synthase 11	0.03	Orthogroups_2024-Update
Glyma.15G046300	No alias	3-ketoacyl-CoA synthase 7	0.02	Orthogroups_2024-Update
Glyma.20G115500	No alias	3-ketoacyl-CoA synthase 6	0.03	Orthogroups_2024-Update
HORVU1Hr1G090730.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
HORVU5Hr1G056870.5	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
HORVU6Hr1G036950.4	No alias	3-ketoacyl-CoA synthase *(KCS)	0.05	Orthogroups_2024-Update
LOC_Os03g12030	No alias	3-ketoacyl-CoA synthase, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os03g14170	No alias	3-ketoacyl-CoA synthase, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g49900	No alias	3-ketoacyl-CoA synthase, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00008960-RA	No alias	(at2g26640 : 707.0) Encodes KCS11, a member of the...	0.02	Orthogroups_2024-Update
Potri.002G178000	No alias	3-ketoacyl-CoA synthase 1	0.03	Orthogroups_2024-Update
Potri.010G125300	No alias	3-ketoacyl-CoA synthase 6	0.03	Orthogroups_2024-Update
Potri.013G119600	No alias	3-ketoacyl-CoA synthase 19	0.02	Orthogroups_2024-Update
Potri.015G133700	No alias	3-ketoacyl-CoA synthase 6	0.03	Orthogroups_2024-Update
Potri.018G032200	No alias	3-ketoacyl-CoA synthase 11	0.04	Orthogroups_2024-Update
Pp1s8_88V6	No alias	beta-ketoacyl- synthase	0.02	Orthogroups_2024-Update
Seita.9G285300.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Seita.9G487500.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Sobic.001G264500.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Sobic.001G453200.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Sobic.001G495500.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
Sobic.005G168700.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Sopen02g030550	No alias	FAE1/Type III polyketide synthase-like protein	0.03	Orthogroups_2024-Update
Sopen04g034040	No alias	FAE1/Type III polyketide synthase-like protein	0.03	Orthogroups_2024-Update
Sopen05g005020	No alias	FAE1/Type III polyketide synthase-like protein	0.02	Orthogroups_2024-Update
Sopen06g024120	No alias	FAE1/Type III polyketide synthase-like protein	0.02	Orthogroups_2024-Update
Sopen08g021190	No alias	FAE1/Type III polyketide synthase-like protein	0.02	Orthogroups_2024-Update
Sopen10g005030	No alias	FAE1/Type III polyketide synthase-like protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	InterProScan predictions
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0005244	voltage-gated ion channel activity	IEP	Predicted GO
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Predicted GO
MF	GO:0005253	anion channel activity	IEP	Predicted GO
MF	GO:0005254	chloride channel activity	IEP	Predicted GO
BP	GO:0006605	protein targeting	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006821	chloride transport	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
MF	GO:0008198	ferrous iron binding	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
MF	GO:0008308	voltage-gated anion channel activity	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
MF	GO:0022832	voltage-gated channel activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
CC	GO:0031012	extracellular matrix	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
CC	GO:0044421	extracellular region part	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	402	481
IPR013601	FAE1_typ3_polyketide_synth	98	385

External Links

No external refs found!

Bradi2g16050

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation