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  5. Bradi2g16710

Bradi2g16710


Description : Nucleotide-diphospho-sugar transferases superfamily protein


Gene families : OG_42_0006165 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g16710
Cluster HCCA clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G119256 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os05g48750 No alias 3-deoxy-manno-octulosonate cytidylyltransferase,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000814 ESCRT II complex IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
InterPro domains Description Start Stop
IPR003329 Cytidylyl_trans 47 256
No external refs found!