Description : Transducin/WD40 repeat-like superfamily protein
Gene families : OG_42_0002129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002129_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi2g17350 | |
Cluster | HCCA clusters: Cluster_57 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
266532 | No alias | receptor for activated C kinase 1B | 0.05 | Orthogroups_2024-Update | |
At1g18080 | No alias | RACK1A_AT [Source:UniProtKB/TrEMBL;Acc:A0A178WHX3] | 0.03 | Orthogroups_2024-Update | |
At1g48630 | No alias | RACK1B_AT [Source:UniProtKB/TrEMBL;Acc:A0A178W908] | 0.03 | Orthogroups_2024-Update | |
At3g18130 | No alias | Receptor for activated C kinase 1C... | 0.07 | Orthogroups_2024-Update | |
Brara.A02955.1 | No alias | component *(RACK1) of small ribosomal-subunit (SSU) proteome | 0.11 | Orthogroups_2024-Update | |
Brara.E02380.1 | No alias | component *(RACK1) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
Brara.H02438.1 | No alias | component *(RACK1) of small ribosomal-subunit (SSU) proteome | 0.1 | Orthogroups_2024-Update | |
Brara.I04799.1 | No alias | component *(RACK1) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Cre06.g278222 | No alias | receptor for activated C kinase 1C | 0.01 | Orthogroups_2024-Update | |
GRMZM2G040477 | No alias | Transducin/WD40 repeat-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.05G243800 | No alias | receptor for activated C kinase 1C | 0.05 | Orthogroups_2024-Update | |
Glyma.08G051600 | No alias | receptor for activated C kinase 1C | 0.06 | Orthogroups_2024-Update | |
HORVU1Hr1G083710.2 | No alias | component *(RACK1) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
HORVU3Hr1G063670.2 | No alias | component *(RACK1) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Kfl00025_0440 | kfl00025_0440_v1.... | (p25387|gblp_chlre : 555.0) Guanine nucleotide-binding... | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g49290 | No alias | WD repeat-containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os05g47890 | No alias | WD domain, G-beta repeat domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
Mp3g15630.1 | No alias | associated component RACK1 of SSU proteome | 0.03 | Orthogroups_2024-Update | |
Potri.012G052700 | No alias | Transducin/WD40 repeat-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Potri.015G041600 | No alias | Transducin/WD40 repeat-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Seita.3G155500.1 | No alias | component *(RACK1) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Seita.5G275300.1 | No alias | component *(RACK1) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.009G223300.1 | No alias | component *(RACK1) of small ribosomal-subunit (SSU) proteome | 0.08 | Orthogroups_2024-Update | |
Solyc03g119040 | No alias | LeArcA2 protein containing 7 WD40 repeats | 0.09 | Orthogroups_2024-Update | |
Sopen03g037930 | No alias | WD domain, G-beta repeat | 0.08 | Orthogroups_2024-Update | |
Sopen06g026300 | No alias | WD domain, G-beta repeat | 0.08 | Orthogroups_2024-Update | |
Sopen12g020110 | No alias | WD domain, G-beta repeat | 0.09 | Orthogroups_2024-Update | |
evm.model.contig_2334.1 | No alias | (p25387|gblp_chlre : 464.0) Guanine nucleotide-binding... | 0.12 | Orthogroups_2024-Update | |
evm.model.tig00000169.6 | No alias | (p25387|gblp_chlre : 478.0) Guanine nucleotide-binding... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0008150 | biological_process | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
CC | GO:0071821 | FANCM-MHF complex | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
No external refs found! |