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Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_42_0014400 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0014400_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi2g18717 | |
| Cluster | HCCA clusters: Cluster_82 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Predicted GO |
| MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Predicted GO |
| MF | GO:0005216 | ion channel activity | IEP | Predicted GO |
| MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Predicted GO |
| MF | GO:0008066 | glutamate receptor activity | IEP | Predicted GO |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Predicted GO |
| BP | GO:0016458 | gene silencing | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Predicted GO |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Predicted GO |
| MF | GO:0022835 | transmitter-gated channel activity | IEP | Predicted GO |
| MF | GO:0022836 | gated channel activity | IEP | Predicted GO |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Predicted GO |
| MF | GO:0022839 | ion gated channel activity | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0030594 | neurotransmitter receptor activity | IEP | Predicted GO |
| BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
| MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| MF | GO:0038023 | signaling receptor activity | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| MF | GO:0043531 | ADP binding | IEP | Predicted GO |
| BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
| MF | GO:0060089 | molecular transducer activity | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 636 | 680 |
| IPR002885 | Pentatricopeptide_repeat | 431 | 460 |
| IPR002885 | Pentatricopeptide_repeat | 131 | 158 |
| IPR002885 | Pentatricopeptide_repeat | 607 | 631 |
| IPR002885 | Pentatricopeptide_repeat | 535 | 556 |
| IPR002885 | Pentatricopeptide_repeat | 232 | 262 |
| IPR002885 | Pentatricopeptide_repeat | 402 | 429 |
| IPR002885 | Pentatricopeptide_repeat | 103 | 128 |
| No external refs found! |