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  5. Bradi2g19960

Bradi2g19960


Description : tubby like protein 7


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g19960
Cluster HCCA clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
At2g18280 No alias Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:B9DGB6] 0.03 Orthogroups_2024-Update
GRMZM2G068586 No alias tubby like protein 7 0.02 Orthogroups_2024-Update
Glyma.01G173700 No alias tubby like protein 2 0.03 Orthogroups_2024-Update
HORVU0Hr1G001350.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g47640 No alias OsFBT4 - F-box and tubby domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.010G031000 No alias tubby like protein 3 0.04 Orthogroups_2024-Update
Seita.3G148500.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G404200.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc09g074510 No alias Tubby-like F-box protein (AHRD V3.3 *** M0RYY8_MUSAM) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 54 99
IPR000007 Tubby_C 117 370
No external refs found!