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  5. Sopen06g031380

Sopen06g031380


Description : ATPase family associated with various cellular activities (AAA)


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g031380
Cluster HCCA clusters: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AC233949.1_FG004 No alias ATPase, AAA-type, CDC48 protein 0.02 Orthogroups_2024-Update
Brara.E03061.1 No alias platform ATPase CDC48 0.03 Orthogroups_2024-Update
HORVU4Hr1G016200.14 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp1g25630.1 No alias platform ATPase (CDC48) 0.02 Orthogroups_2024-Update
PSME_00007725-RA No alias (at3g53230 : 1417.0) ATPase, AAA-type, CDC48 protein;... 0.02 Orthogroups_2024-Update
PSME_00035217-RA No alias (p54774|cdc48_soybn : 1380.0) Cell division cycle... 0.02 Orthogroups_2024-Update
Pp1s115_6V6 No alias transitional endoplasmic reticulum 0.03 Orthogroups_2024-Update
Sobic.005G098800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc06g074980 No alias cell division cycle 48 (AHRD V3.3 *** AT3G09840.1) 0.02 Orthogroups_2024-Update
evm.model.tig00021463.11 No alias (at3g09840 : 945.0) Encodes a cell division cycle... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004201 Cdc48_dom2 131 195
IPR003338 CDC4_N-term_subdom 30 111
IPR003959 ATPase_AAA_core 518 651
IPR003959 ATPase_AAA_core 245 374
No external refs found!