Description : erf domain protein 9
Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi2g21060 | |
Cluster | HCCA clusters: Cluster_83 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At4g11140 | No alias | Ethylene-responsive transcription factor CRF1... | 0.04 | Orthogroups_2024-Update | |
Bradi3g41543 | No alias | Integrase-type DNA-binding superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.D02714.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Glyma.13G233900 | No alias | ethylene response factor 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.15G152000 | No alias | ethylene-responsive element binding protein | 0.03 | Orthogroups_2024-Update | |
HORVU0Hr1G036300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Potri.002G043300 | No alias | erf domain protein 9 | 0.02 | Orthogroups_2024-Update | |
Sobic.001G481600.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc02g077840 | No alias | Ethylene-responsive transcription factor, putative (AHRD... | 0.03 | Orthogroups_2024-Update | |
Solyc04g072900 | No alias | dehydration-responsive element binding protein 3 | 0.02 | Orthogroups_2024-Update | |
Solyc05g052040 | No alias | Ethylene-responsive transcription factor (AHRD V3.3 ***... | 0.05 | Orthogroups_2024-Update | |
Sopen10g008890 | No alias | AP2 domain | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
CC | GO:0005681 | spliceosomal complex | IEP | Predicted GO |
BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001471 | AP2/ERF_dom | 34 | 84 |
No external refs found! |