Description : Phosphoribosylanthranilate isomerase (AHRD V3.3 *** F1BPW4_SOLPN)
Gene families : OG_42_0004481 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004481_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc02g076760 | |
Cluster | HCCA clusters: Cluster_96 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.B00183.1 | No alias | phosphoribosyanthranilate isomerase | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004640 | phosphoribosylanthranilate isomerase activity | IEA | InterProScan predictions |
BP | GO:0006568 | tryptophan metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000149 | SNARE binding | IEP | Predicted GO |
MF | GO:0000175 | 3'-5'-exoribonuclease activity | IEP | Predicted GO |
BP | GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | IEP | Predicted GO |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
MF | GO:0004532 | exoribonuclease activity | IEP | Predicted GO |
MF | GO:0004535 | poly(A)-specific ribonuclease activity | IEP | Predicted GO |
MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
MF | GO:0005319 | lipid transporter activity | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Predicted GO |
BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
BP | GO:0006869 | lipid transport | IEP | Predicted GO |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016896 | exoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
MF | GO:0019905 | syntaxin binding | IEP | Predicted GO |
BP | GO:0044030 | regulation of DNA methylation | IEP | Predicted GO |
CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | Predicted GO |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001240 | PRAI | 62 | 262 |
No external refs found! |