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  5. Sopen06g031790

Sopen06g031790


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g031790
Cluster HCCA clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
A4A49_12312 No alias dof zinc finger protein dof2.1 0.07 Orthogroups_2024-Update
A4A49_33562 No alias dof zinc finger protein dof4.6 0.02 Orthogroups_2024-Update
At4g21050 No alias Dof zinc finger protein DOF4.4... 0.03 Orthogroups_2024-Update
Brara.D01727.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.E02083.1 No alias transcription factor *(DOF) 0.06 Orthogroups_2024-Update
Brara.G01208.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.H00201.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Glyma.01G049400 No alias cycling DOF factor 3 0.04 Orthogroups_2024-Update
Glyma.13G062500 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
Glyma.16G022900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.19G023200 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
HORVU2Hr1G119110.4 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
HORVU3Hr1G072970.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
MA_175298g0010 No alias (at5g39660 : 214.0) Dof-type zinc finger... 0.04 Orthogroups_2024-Update
MA_83624g0010 No alias (at5g60200 : 114.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
PSME_00040668-RA No alias (at5g02460 : 137.0) Dof-type zinc finger DNA-binding... 0.05 Orthogroups_2024-Update
PSME_00056872-RA No alias (at5g60200 : 116.0) Encodes a Dof-type transcription... 0.02 Orthogroups_2024-Update
Potri.001G238400 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Seita.3G371900.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.5G136300.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.001G179300.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.009G196100.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g088070 No alias Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 20 76
No external refs found!