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Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi2g25480 | |
| Cluster | HCCA clusters: Cluster_127 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 109988 | No alias | mitochondrial editing factor 22 | 0.08 | Orthogroups_2024-Update | |
| 26786 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| At4g31070 | No alias | Pentatricopeptide repeat-containing protein At4g31070,... | 0.06 | Orthogroups_2024-Update | |
| Bradi1g12697 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Bradi2g09441 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Bradi2g48635 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi2g61387 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | Orthogroups_2024-Update | |
| Bradi4g19150 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi4g41840 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.E00200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.E02154.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Glyma.08G213800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G058070.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G115530.39 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| LOC_Os03g62690 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g64370 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os04g02850 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os11g44930 | No alias | pentatricopeptide repeat domain containing protein,... | 0.02 | Orthogroups_2024-Update | |
| MA_105629g0010 | No alias | (at3g49142 : 670.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| MA_11454g0010 | No alias | (at4g13650 : 676.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| MA_122899g0010 | No alias | (at3g57430 : 674.0) Encodes a chloroplast RNA editing... | 0.03 | Orthogroups_2024-Update | |
| MA_139163g0010 | No alias | (at4g13650 : 549.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| MA_141034g0010 | No alias | (at4g33170 : 601.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| MA_16917g0010 | No alias | (at4g13650 : 578.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| MA_183738g0010 | No alias | (at3g12770 : 617.0) Encodes a pentatricopeptide repeat... | 0.02 | Orthogroups_2024-Update | |
| MA_210823g0010 | No alias | (at4g37170 : 594.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| MA_25515g0010 | No alias | (at4g13650 : 660.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| MA_291996g0010 | No alias | (at1g11290 : 549.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| MA_36643g0010 | No alias | (at3g03580 : 738.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| MA_36655g0010 | No alias | (at4g39530 : 586.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| MA_442926g0010 | No alias | (at4g13650 : 697.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| MA_50118g0010 | No alias | (at3g03580 : 671.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| MA_63139g0020 | No alias | (at4g13650 : 686.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| MA_6329g0010 | No alias | (at4g02750 : 542.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
| MA_656915g0010 | No alias | (at4g18750 : 657.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| MA_658463g0010 | No alias | (at4g02750 : 623.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| MA_71420g0010 | No alias | (at2g22070 : 548.0) pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
| MA_77437g0010 | No alias | (at1g11290 : 636.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| MA_8319g0010 | No alias | (at4g02750 : 466.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| MA_9384g0020 | No alias | (at3g49170 : 527.0) embryo defective 2261 (EMB2261);... | 0.02 | Orthogroups_2024-Update | |
| MA_944980g0010 | No alias | (at3g12770 : 548.0) Encodes a pentatricopeptide repeat... | 0.04 | Orthogroups_2024-Update | |
| MA_98224g0010 | No alias | (at4g13650 : 670.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00001942-RA | No alias | (at3g57430 : 689.0) Encodes a chloroplast RNA editing... | 0.02 | Orthogroups_2024-Update | |
| PSME_00002640-RA | No alias | (at4g13650 : 724.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00003874-RA | No alias | (at4g33170 : 590.0) Tetratricopeptide repeat (TPR)-like... | 0.06 | Orthogroups_2024-Update | |
| PSME_00005130-RA | No alias | (at4g33990 : 552.0) embryo defective 2758 (EMB2758);... | 0.03 | Orthogroups_2024-Update | |
| PSME_00007759-RA | No alias | (at3g12770 : 656.0) Encodes a pentatricopeptide repeat... | 0.06 | Orthogroups_2024-Update | |
| PSME_00010401-RA | No alias | (at4g18750 : 645.0) Encodes a pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00011508-RA | No alias | (at2g27610 : 744.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| PSME_00012885-RA | No alias | (at1g08070 : 603.0) Encodes a chloroplast RNA editing... | 0.04 | Orthogroups_2024-Update | |
| PSME_00013106-RA | No alias | (at4g13650 : 681.0) Pentatricopeptide repeat (PPR)... | 0.05 | Orthogroups_2024-Update | |
| PSME_00014659-RA | No alias | (at1g11290 : 712.0) Pentatricopeptide Repeat Protein... | 0.06 | Orthogroups_2024-Update | |
| PSME_00032333-RA | No alias | (at4g18750 : 689.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00036890-RA | No alias | (at1g11290 : 679.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
| PSME_00039409-RA | No alias | (at4g18750 : 537.0) Encodes a pentatricopeptide (PPR)... | 0.04 | Orthogroups_2024-Update | |
| PSME_00041541-RA | No alias | (at3g12770 : 598.0) Encodes a pentatricopeptide repeat... | 0.02 | Orthogroups_2024-Update | |
| PSME_00042206-RA | No alias | (at1g11290 : 595.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00055621-RA | No alias | (at1g16480 : 701.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00056507-RA | No alias | (at1g16480 : 719.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00057163-RA | No alias | (at1g11290 : 707.0) Pentatricopeptide Repeat Protein... | 0.06 | Orthogroups_2024-Update | |
| Potri.001G258500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.005G202600 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.T137000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.2G031700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.2G091900.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.2G177900.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.2G203900.1 | No alias | RNA editing factor *(OTP87) | 0.02 | Orthogroups_2024-Update | |
| Seita.4G216600.1 | No alias | Unknown function | 0.07 | Orthogroups_2024-Update | |
| Seita.4G225800.1 | No alias | Unknown function | 0.08 | Orthogroups_2024-Update | |
| Seita.5G124400.1 | No alias | RNA editing factor *(OTP81) | 0.05 | Orthogroups_2024-Update | |
| Seita.5G326600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.9G477500.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G509700.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G384800.1 | No alias | Unknown function | 0.12 | Orthogroups_2024-Update | |
| Solyc01g097670 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g051780 | No alias | Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G57790.2) | 0.03 | Orthogroups_2024-Update | |
| Solyc05g023900 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc09g059580 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
| Solyc09g092150 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.06 | Orthogroups_2024-Update | |
| Solyc11g005960 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Sopen01g015270 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen01g033110 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen01g038950 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen03g028590 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen05g018650 | No alias | PPR repeat family | 0.01 | Orthogroups_2024-Update | |
| Sopen06g022100 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen07g022420 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
| Sopen09g031050 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
| Sopen11g002630 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen11g009180 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen11g024970 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen11g029050 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00000808.10 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |