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  5. Bradi2g26000

Bradi2g26000


Description : basic chitinase


Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g26000

Target Alias Description ECC score Gene Family Method Actions
14768 No alias basic chitinase 0.03 Orthogroups_2024-Update
At1g02360 No alias Chitinase family protein [Source:TAIR;Acc:AT1G02360] 0.03 Orthogroups_2024-Update
Brara.C03414.1 No alias basic chitinase *(CHIB) 0.03 Orthogroups_2024-Update
Glyma.02G007400 No alias Chitinase family protein 0.02 Orthogroups_2024-Update
Glyma.19G221800 No alias Chitinase family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G017670.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_80085g0010 No alias (q9frv0|chic_secce : 335.0) Basic endochitinase C... 0.02 Orthogroups_2024-Update
Mp4g01780.1 No alias Endochitinase CH5B OS=Phaseolus vulgaris... 0.01 Orthogroups_2024-Update
PSME_00050349-RA No alias (p52403|chi1_soltu : 337.0) Endochitinase 1 precursor... 0.02 Orthogroups_2024-Update
Potri.004G182000 No alias basic chitinase 0.02 Orthogroups_2024-Update
Seita.9G551200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.009G012100.1 No alias basic chitinase *(CHIB) 0.07 Orthogroups_2024-Update
Solyc02g061770 No alias chitinase 2 0.02 Orthogroups_2024-Update
Solyc02g082920 No alias acidic extracellular 26 kD chitinase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan predictions
BP GO:0006032 chitin catabolic process IEA InterProScan predictions
MF GO:0008061 chitin binding IEA InterProScan predictions
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 161 396
IPR001002 Chitin-bd_1 91 128
IPR001002 Chitin-bd_1 44 81
No external refs found!