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  5. Bradi2g26970

Bradi2g26970


Description : SEUSS transcriptional co-regulator


Gene families : OG_42_0001027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g26970
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
409769 No alias SEUSS transcriptional co-regulator 0.02 Orthogroups_2024-Update
A4A49_15866 No alias transcriptional corepressor seuss 0.03 Orthogroups_2024-Update
At1g43850 No alias Transcriptional corepressor SEUSS... 0.02 Orthogroups_2024-Update
Bradi1g49497 No alias SEUSS-like 3 0.03 Orthogroups_2024-Update
Glyma.14G119800 No alias SEUSS transcriptional co-regulator 0.03 Orthogroups_2024-Update
MA_33392g0010 No alias (at5g62090 : 131.0) SEUSS-like 2 (SLK2); BEST... 0.03 Orthogroups_2024-Update
MA_9903188g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00036824-RA No alias (at5g62090 : 384.0) SEUSS-like 2 (SLK2); BEST... 0.03 Orthogroups_2024-Update
PSME_00037034-RA No alias (at1g43850 : 471.0) Encodes a transcriptional... 0.03 Orthogroups_2024-Update
Seita.2G044700.1 No alias adapter component *(SEU/SLK) of transcriptional... 0.04 Orthogroups_2024-Update
Sobic.005G079800.1 No alias adapter component *(SEU/SLK) of transcriptional... 0.03 Orthogroups_2024-Update
Solyc03g026190 No alias Transcriptional corepressor SEUSS-like protein (AHRD... 0.04 Orthogroups_2024-Update
Solyc06g059750 No alias Transcriptional corepressor SEUSS, putative (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 323 576
No external refs found!