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  5. Bradi2g27720

Bradi2g27720


Description : Histone superfamily protein


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g27720
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
438193 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Bradi1g49990 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g49997 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Brara.B00387.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Cre06.g264650 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274000 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g276850 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g504650 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g506300 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g506500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre17.g708150 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708700 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g709050 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G130079 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G176358 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G355773 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G188700 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G202500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G245000 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G130900 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G342000 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G266200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G058490.4 No alias histone *(H3) 0.05 Orthogroups_2024-Update
HORVU7Hr1G012820.2 No alias histone *(H3) 0.02 Orthogroups_2024-Update
HORVU7Hr1G025200.1 No alias histone *(H3) 0.05 Orthogroups_2024-Update
MA_561217g0010 No alias (at5g65360 : 228.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
Mp7g18030.1 No alias histone (H3) 0.02 Orthogroups_2024-Update
PSME_00005861-RA No alias (at5g65360 : 181.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00032394-RA No alias (at5g10980 : 93.6) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.014G096400 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Pp1s12_93V6 No alias histone h3 0.02 Orthogroups_2024-Update
Seita.7G095500.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Solyc01g080600 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.02 Orthogroups_2024-Update
Solyc01g086820 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.02 Orthogroups_2024-Update
Solyc01g095650 No alias Histone H3 like protein (AHRD V3.3 *-* Q7XIZ8_TURGL) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!