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  5. Bradi2g27977

Bradi2g27977


Description : Protein phosphatase 2C family protein


Gene families : OG_42_0000218 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g27977
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Bradi4g44750 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
GRMZM2G071196 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Glyma.09G249700 No alias Protein phosphatase 2C family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G039710.1 No alias clade E phosphatase 0.05 Orthogroups_2024-Update
PSME_00022377-RA No alias (at3g02750 : 283.0) Protein phosphatase 2C family... 0.04 Orthogroups_2024-Update
Sobic.004G136400.1 No alias clade E phosphatase 0.03 Orthogroups_2024-Update
Solyc07g066260 No alias Protein phosphatase 2C family protein (AHRD V3.3 *** AT1G16220.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 71 315
No external refs found!