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  5. Bradi2g29960

Bradi2g29960


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g29960
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
A4A49_13998 No alias ethylene-responsive transcription factor 4 0.03 Orthogroups_2024-Update
A4A49_15668 No alias ethylene-responsive transcription factor rap2-12 0.03 Orthogroups_2024-Update
A4A49_20472 No alias ethylene-responsive transcription factor 13 0.02 Orthogroups_2024-Update
A4A49_21566 No alias ethylene-responsive transcription factor erf087 0.03 Orthogroups_2024-Update
A4A49_40092 No alias ethylene-responsive transcription factor crf2 0.03 Orthogroups_2024-Update
At1g22190 No alias Ethylene-responsive transcription factor RAP2-13... 0.02 Orthogroups_2024-Update
At1g28370 No alias ERF domain protein 11 [Source:TAIR;Acc:AT1G28370] 0.02 Orthogroups_2024-Update
At2g25820 No alias Ethylene-responsive transcription factor ERF042... 0.02 Orthogroups_2024-Update
At2g35700 No alias ERF38 [Source:UniProtKB/TrEMBL;Acc:A0A178VWJ3] 0.03 Orthogroups_2024-Update
At5g07580 No alias Ethylene-responsive transcription factor ERF106... 0.03 Orthogroups_2024-Update
At5g25190 No alias Ethylene-responsive transcription factor ERF003... 0.04 Orthogroups_2024-Update
At5g61590 No alias Ethylene-responsive transcription factor ERF107... 0.03 Orthogroups_2024-Update
Bradi2g04000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g17610 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Brara.A01769.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Brara.B01460.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Brara.B02952.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.C01453.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.C01524.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.03 Orthogroups_2024-Update
Brara.C03562.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.D01886.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.E00145.1 No alias subgroup ERF-VI transcription factor & transcription... 0.02 Orthogroups_2024-Update
Brara.F02347.1 No alias subgroup ERF-X transcription factor 0.04 Orthogroups_2024-Update
Brara.G00807.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.G01190.1 No alias subgroup ERF-II-DEAR transcription factor 0.02 Orthogroups_2024-Update
Brara.H01496.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Brara.I00546.1 No alias cutin and suberin biosynthesis transcription factor... 0.02 Orthogroups_2024-Update
Brara.I00667.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.I01985.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.I02948.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.I02951.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.J02660.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G053503 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G111415 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G171179 No alias related to AP2 12 0.02 Orthogroups_2024-Update
GRMZM2G174917 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
GRMZM2G369472 No alias ethylene-responsive element binding protein 0.02 Orthogroups_2024-Update
GRMZM2G421033 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
Glyma.07G044300 No alias related to AP2 12 0.04 Orthogroups_2024-Update
Glyma.07G114000 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.07G156200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G007000 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.10G119100 No alias Integrase-type DNA-binding superfamily protein 0.06 Orthogroups_2024-Update
Glyma.14G056200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G055710.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G070410.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G060140.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G082880.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
LOC_Os01g21120 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g43970 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g54160 No alias AP2 domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g08500 No alias AP2 domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g46400 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g25260 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g09390 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g11480 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g41130 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_67841g0010 No alias (at2g44940 : 151.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_938274g0010 No alias (at4g17500 : 97.8) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
Mp7g17020.1 No alias Dehydration-responsive element-binding protein 2C... 0.02 Orthogroups_2024-Update
PSME_00005187-RA No alias (at4g17500 : 144.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00012644-RA No alias (at4g17500 : 84.3) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00026875-RA No alias (at1g01250 : 97.8) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00042940-RA No alias (at1g53910 : 121.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00050134-RA No alias (at5g19790 : 92.0) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
Potri.001G155700 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.003G081200 No alias ethylene responsive element binding factor 1 0.04 Orthogroups_2024-Update
Potri.005G168700 No alias related to AP2 4 0.02 Orthogroups_2024-Update
Potri.007G090600 No alias related to AP2 4 0.03 Orthogroups_2024-Update
Potri.013G158500 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Pp1s2_404V6 No alias erf2 transcription factor 0.02 Orthogroups_2024-Update
Pp1s72_230V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G271000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G156200.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Seita.2G280400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G016400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G041600.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Seita.4G060700.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G297100.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G014800.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Sobic.005G103100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G156100.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Solyc01g065980 No alias Ethylene Response Factor E.4 0.03 Orthogroups_2024-Update
Solyc03g007460 No alias Solanum lycopersicum Cytokinin Response Factor 4 0.03 Orthogroups_2024-Update
Solyc03g026280 No alias CBF 0.02 Orthogroups_2024-Update
Solyc05g052030 No alias ethylene response factor 4 0.03 Orthogroups_2024-Update
Solyc12g009240 No alias Ethylene-responsive transcription factor ERF017 (AHRD... 0.02 Orthogroups_2024-Update
Sopen02g037700 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen05g030590 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen05g030960 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen06g022520 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen06g025620 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen07g021830 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen07g028150 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen09g032860 No alias AP2 domain 0.02 Orthogroups_2024-Update
evm.model.tig00000093.224 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0047750 cholestenol delta-isomerase activity IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 130 180
No external refs found!