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  5. Bradi2g30423

Bradi2g30423


Description : AT-hook motif nuclear-localized protein 20


Gene families : OG_42_0000350 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g30423
Cluster HCCA clusters: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
A4A49_18536 No alias at-hook motif nuclear-localized protein 23 0.03 Orthogroups_2024-Update
At3g55560 No alias AT-hook motif nuclear-localized protein... 0.03 Orthogroups_2024-Update
Brara.C04634.1 No alias AHL clade-A transcription factor 0.03 Orthogroups_2024-Update
Brara.D02740.1 No alias AHL clade-A transcription factor 0.03 Orthogroups_2024-Update
Brara.G01666.1 No alias AHL clade-A transcription factor 0.02 Orthogroups_2024-Update
Mp7g18120.1 No alias AT-hook motif nuclear-localized protein 20... 0.02 Orthogroups_2024-Update
Potri.001G115200 No alias Predicted AT-hook DNA-binding family protein 0.04 Orthogroups_2024-Update
Potri.002G149300 No alias AT-hook motif nuclear-localized protein 22 0.03 Orthogroups_2024-Update
Potri.003G116900 No alias Predicted AT-hook DNA-binding family protein 0.02 Orthogroups_2024-Update
Seita.6G053700.1 No alias AHL clade-A transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G134900.5 No alias AHL clade-A transcription factor 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 117 231
No external refs found!