Sopen06g032440

Description : Dof domain, zinc finger

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g032440
Cluster	HCCA clusters: Cluster_271

Target	Alias	Description	ECC score	Gene Family Method
A4A49_04752	No alias	dof zinc finger protein dof3.5	0.02	Orthogroups_2024-Update
A4A49_12312	No alias	dof zinc finger protein dof2.1	0.05	Orthogroups_2024-Update
A4A49_26058	No alias	dof zinc finger protein dof4.6	0.03	Orthogroups_2024-Update
At4g38000	No alias	DOF4.7 [Source:UniProtKB/TrEMBL;Acc:A0A178V5K8]	0.02	Orthogroups_2024-Update
Bradi3g25670	No alias	cycling DOF factor 1	0.02	Orthogroups_2024-Update
Brara.E02083.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Brara.I00088.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Brara.I02955.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.J00542.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Brara.J01378.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Glyma.01G049400	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.07G193900	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.09G237000	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.13G230200	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.17G101000	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
Glyma.17G180600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.18G260500	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
HORVU2Hr1G017290.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
LOC_Os01g48290	No alias	dof zinc finger domain containing protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g15350	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g42200	No alias	dof zinc finger domain containing protein, putative, expressed	0.04	Orthogroups_2024-Update
MA_123810g0010	No alias	(at5g60850 : 129.0) Encodes a zinc finger protein.; OBF...	0.02	Orthogroups_2024-Update
MA_83624g0010	No alias	(at5g60200 : 114.0) Encodes a Dof-type transcription...	0.03	Orthogroups_2024-Update
MA_97259g0020	No alias	(at5g62430 : 134.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
Potri.002G129600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Potri.009G029500	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
Pp1s351_46V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Seita.1G290700.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.9G206300.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.9G452000.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.007G223200.2	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc03g112930	No alias	Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC)	0.03	Orthogroups_2024-Update
Solyc06g005130	No alias	Dof zinc finger protein (AHRD V3.3 *** W9RMR9_9ROSA)	0.03	Orthogroups_2024-Update
Solyc10g086440	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	70	125

External Links

No external refs found!

Sopen06g032440

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation