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  5. Bradi2g33270

Bradi2g33270


Description : CCCH-type zinc finger family protein


Gene families : OG_42_0000745 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000745_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g33270
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
At1g03790 No alias Zinc finger CCCH domain-containing protein 2... 0.03 Orthogroups_2024-Update
Brara.I01833.1 No alias regulatory factor *(TZF) of mRNA stress granule formation 0.04 Orthogroups_2024-Update
Brara.J00209.1 No alias regulatory factor *(TZF) of mRNA stress granule formation 0.03 Orthogroups_2024-Update
Glyma.07G126800 No alias CCCH-type zinc finger family protein 0.05 Orthogroups_2024-Update
LOC_Os05g45020 No alias zinc finger/CCCH transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_98656g0010 No alias (at2g19810 : 248.0) CCCH-type zinc finger family... 0.03 Orthogroups_2024-Update
Pp1s177_93V6 No alias ccch-type zinc finger protein 0.02 Orthogroups_2024-Update
Sobic.009G072100.1 No alias regulatory factor *(TZF) of mRNA stress granule formation 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 116 138
No external refs found!