Sopen06g032750

Description : Nucleic acid binding protein NABP

Gene families : OG_42_0001049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g032750
Cluster	HCCA clusters: Cluster_188

Target	Alias	Description	ECC score	Gene Family Method	Actions
Seita.5G379000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012940	NABP	286	337
IPR012940	NABP	338	657
IPR001313	Pumilio_RNA-bd_rpt	876	908
IPR001313	Pumilio_RNA-bd_rpt	731	760
IPR001313	Pumilio_RNA-bd_rpt	803	830
IPR001313	Pumilio_RNA-bd_rpt	694	724
IPR001313	Pumilio_RNA-bd_rpt	769	799
IPR001313	Pumilio_RNA-bd_rpt	925	951
IPR001313	Pumilio_RNA-bd_rpt	840	870
IPR001313	Pumilio_RNA-bd_rpt	659	691

External Links

No external refs found!