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  5. Bradi2g34660

Bradi2g34660


Description : RING/U-box superfamily protein


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g34660
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
A4A49_14077 No alias putative e3 ubiquitin-protein ligase rhg1a 0.02 Orthogroups_2024-Update
A4A49_35943 No alias putative e3 ubiquitin-protein ligase hip1 0.03 Orthogroups_2024-Update
At5g42940 No alias Probable E3 ubiquitin-protein ligase RHG1A... 0.02 Orthogroups_2024-Update
Bradi5g24120 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.C03555.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E01471.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.F03830.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
GRMZM2G118344 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G122223 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G174926 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G103300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G041000 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Glyma.06G076600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G234300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G180300 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G158500 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G180000 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G082970.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
HORVU3Hr1G061010.9 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Kfl00027_0540 kfl00027_0540_v1.1 (at5g24870 : 106.0) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update
LOC_Os01g06590 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g55510 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_44267g0010 No alias (at2g15530 : 147.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00030521-RA No alias (at5g10650 : 105.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.010G220700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.5G263300.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
Seita.5G280100.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Seita.7G226600.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G272600.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.003G250400.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.004G042100.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.009G232800.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc08g006460 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G10650.2) 0.03 Orthogroups_2024-Update
Solyc10g050170 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G15530.7) 0.02 Orthogroups_2024-Update
Solyc12g096420 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G10650.2) 0.02 Orthogroups_2024-Update
Sopen08g002410 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
MF GO:0005047 signal recognition particle binding IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005785 signal recognition particle receptor complex IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 488 530
No external refs found!