Bradi2g34750

Description : Ribosomal protein S27a / Ubiquitin family protein

Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi2g34750
Cluster	HCCA clusters: Cluster_202

Target	Alias	Description	ECC score	Gene Family Method
101548	No alias	ubiquitin 5	0.02	Orthogroups_2024-Update
19615	No alias	polyubiquitin 10	0.03	Orthogroups_2024-Update
At2g36170	No alias	Ubiquitin-60S ribosomal protein L40-1...	0.04	Orthogroups_2024-Update
At2g47110	No alias	UBQ6 [Source:UniProtKB/TrEMBL;Acc:A0A178VYW3]	0.04	Orthogroups_2024-Update
At3g52590	No alias	Ubiquitin-60S ribosomal protein L40-1...	0.03	Orthogroups_2024-Update
At4g05050	No alias	Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]	0.03	Orthogroups_2024-Update
Brara.C01815.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.C02349.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Brara.E00858.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Brara.E00859.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Brara.G00981.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Brara.G01965.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Brara.I03566.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Brara.I04302.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Cre01.g007051	No alias	Ubiquitin supergroup;Ribosomal protein L40e	0.04	Orthogroups_2024-Update
Cre06.g273600	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.08	Orthogroups_2024-Update
GRMZM2G006293	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.05	Orthogroups_2024-Update
GRMZM2G047732	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.05	Orthogroups_2024-Update
Glyma.01G029200	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.06	Orthogroups_2024-Update
Glyma.02G036000	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.03	Orthogroups_2024-Update
Glyma.03G197600	No alias	ubiquitin extension protein 1	0.02	Orthogroups_2024-Update
Glyma.04G231500	No alias	Ubiquitin supergroup;Ribosomal protein L40e	0.03	Orthogroups_2024-Update
Glyma.06G133600	No alias	Ubiquitin supergroup;Ribosomal protein L40e	0.02	Orthogroups_2024-Update
Glyma.09G023700	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.08	Orthogroups_2024-Update
Glyma.15G129800	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.06	Orthogroups_2024-Update
Glyma.19G195500	No alias	Ubiquitin supergroup;Ribosomal protein L40e	0.09	Orthogroups_2024-Update
HORVU1Hr1G023660.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
HORVU4Hr1G001170.5	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Kfl00345_0130	kfl00345_0130_v1....	(at3g52590 : 254.0) Ubiquitin extension protein;...	0.03	Orthogroups_2024-Update
MA_529552g0010	No alias	(at3g62250 : 229.0) ubiquitin 5 (UBQ5); FUNCTIONS IN:...	0.05	Orthogroups_2024-Update
Mp3g22950.1	No alias	ubiquitin-fold protein (UBQ)	0.02	Orthogroups_2024-Update
Mp4g02760.1	No alias	Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare...	0.02	Orthogroups_2024-Update
Mp7g12490.1	No alias	component RPL40 of LSU proteome component	0.03	Orthogroups_2024-Update
Mp7g14690.1	No alias	component RPS27a of SSU proteome	0.02	Orthogroups_2024-Update
Mp8g00780.1	No alias	component RPL40 of LSU proteome component	0.03	Orthogroups_2024-Update
Mp8g11720.1	No alias	Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis...	0.02	Orthogroups_2024-Update
Potri.001G025300	No alias	ubiquitin 6	0.05	Orthogroups_2024-Update
Potri.012G024300	No alias	Ubiquitin supergroup;Ribosomal protein L40e	0.06	Orthogroups_2024-Update
Pp1s13_40V6	No alias	ubiquitin extension protein	0.04	Orthogroups_2024-Update
Pp1s184_64V6	No alias	ubiquitin extension protein	0.07	Orthogroups_2024-Update
Pp1s241_60V6	No alias	ubiquitin fusion protein	0.02	Orthogroups_2024-Update
Pp1s268_35V6	No alias	ubiquitin fusion protein	0.06	Orthogroups_2024-Update
Pp1s333_9V6	No alias	ubiquitin fusion protein	0.05	Orthogroups_2024-Update
Pp1s56_39V6	No alias	ubiquitin extension protein	0.04	Orthogroups_2024-Update
Pp1s56_52V6	No alias	ubiquitin extension protein	0.07	Orthogroups_2024-Update
Pp1s72_104V6	No alias	polyubiquitin	0.01	Orthogroups_2024-Update
Seita.2G133700.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Seita.5G156000.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Seita.7G270700.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Seita.9G478400.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Sobic.001G444800.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.09	Orthogroups_2024-Update
Sobic.002G135200.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Sobic.002G292500.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Sobic.003G152600.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Sobic.009G054800.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Solyc01g056940	No alias	Ubiquitin	0.06	Orthogroups_2024-Update
Solyc01g096290	No alias	ubiquitin-ribosomal fusion protein	0.05	Orthogroups_2024-Update
Solyc03g082570	No alias	ubiquitin-ribosomal fusion protein	0.03	Orthogroups_2024-Update
Solyc08g008590	No alias	ubiquitin-ribosomal fusion protein	0.04	Orthogroups_2024-Update
Solyc08g083120	No alias	ubiquitin-ribosomal fusion protein	0.04	Orthogroups_2024-Update
Solyc12g098940	No alias	Ubiquitin, putative (AHRD V3.3 *** B9RN74_RICCO)	0.05	Orthogroups_2024-Update
Solyc12g099030	No alias	Ubiquitin, putative (AHRD V3.3 *** B9RN74_RICCO)	0.05	Orthogroups_2024-Update
Sopen01g029970	No alias	Ubiquitin family	0.09	Orthogroups_2024-Update
Sopen01g040060	No alias	Ubiquitin family	0.03	Orthogroups_2024-Update
Sopen03g022330	No alias	Ubiquitin family	0.04	Orthogroups_2024-Update
Sopen08g004410	No alias	Ubiquitin family	0.06	Orthogroups_2024-Update
Sopen08g031340	No alias	Ubiquitin family	0.08	Orthogroups_2024-Update
evm.model.contig_2055.11	No alias	(at3g52590 : 241.0) Ubiquitin extension protein;...	0.04	Orthogroups_2024-Update
evm.model.contig_3445.1	No alias	no hits & (original description: no original description)	0.08	Orthogroups_2024-Update
evm.model.tig00022075.50	No alias	(at3g52590 : 236.0) Ubiquitin extension protein;...	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004089	carbonate dehydratase activity	IEP	Predicted GO
MF	GO:0005102	signaling receptor binding	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
BP	GO:0006066	alcohol metabolic process	IEP	Predicted GO
BP	GO:0006729	tetrahydrobiopterin biosynthetic process	IEP	Predicted GO
MF	GO:0008083	growth factor activity	IEP	Predicted GO
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEP	Predicted GO
BP	GO:0008283	cell proliferation	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016836	hydro-lyase activity	IEP	Predicted GO
BP	GO:0017144	drug metabolic process	IEP	Predicted GO
BP	GO:0019751	polyol metabolic process	IEP	Predicted GO
MF	GO:0019829	cation-transporting ATPase activity	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0030545	receptor regulator activity	IEP	Predicted GO
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Predicted GO
BP	GO:0034311	diol metabolic process	IEP	Predicted GO
BP	GO:0034312	diol biosynthetic process	IEP	Predicted GO
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0042625	ATPase coupled ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Predicted GO
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Predicted GO
BP	GO:0046146	tetrahydrobiopterin metabolic process	IEP	Predicted GO
BP	GO:0046165	alcohol biosynthetic process	IEP	Predicted GO
BP	GO:0046173	polyol biosynthetic process	IEP	Predicted GO
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Predicted GO
MF	GO:0048018	receptor ligand activity	IEP	Predicted GO
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Predicted GO
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000626	Ubiquitin_dom	3	74
IPR002906	Ribosomal_S27a	102	148

External Links

No external refs found!

Bradi2g34750

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation