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Description : Rubber elongation factor protein (REF)
Gene families : OG_42_0001183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001183_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi2g35600 | |
| Cluster | HCCA clusters: Cluster_162 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.B01718.1 | No alias | lipid droplet-associated factor *(LDAP) | 0.04 | Orthogroups_2024-Update | |
| Brara.G02575.1 | No alias | lipid droplet-associated factor *(LDAP) | 0.04 | Orthogroups_2024-Update | |
| Glyma.07G195800 | No alias | Rubber elongation factor protein (REF) | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G019790.11 | No alias | lipid droplet-associated factor *(LDAP) | 0.03 | Orthogroups_2024-Update | |
| PSME_00038248-RA | No alias | (at3g05500 : 95.9) Rubber elongation factor protein... | 0.02 | Orthogroups_2024-Update | |
| PSME_00039672-RA | No alias | (at3g05500 : 184.0) Rubber elongation factor protein... | 0.02 | Orthogroups_2024-Update | |
| Pp1s254_32V6 | No alias | Protein At3g05500 [Arabidopsis thaliana] | 0.03 | Orthogroups_2024-Update | |
| Seita.2G425600.1 | No alias | lipid droplet-associated factor *(LDAP) | 0.02 | Orthogroups_2024-Update | |
| Seita.3G036300.1 | No alias | lipid droplet-associated factor *(LDAP) | 0.04 | Orthogroups_2024-Update | |
| Sobic.002G412800.1 | No alias | lipid droplet-associated factor *(LDAP) | 0.02 | Orthogroups_2024-Update | |
| Solyc01g099680 | No alias | Rubber elongation factor protein, putative (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc05g015390 | No alias | Rubber elongation factor protein (AHRD V3.3 *** A0A072TUR8_MEDTR) | 0.05 | Orthogroups_2024-Update | |
| Sopen05g010680 | No alias | Rubber elongation factor protein (REF) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
| MF | GO:0005215 | transporter activity | IEP | Predicted GO |
| BP | GO:0006810 | transport | IEP | Predicted GO |
| BP | GO:0006811 | ion transport | IEP | Predicted GO |
| BP | GO:0006812 | cation transport | IEP | Predicted GO |
| BP | GO:0006813 | potassium ion transport | IEP | Predicted GO |
| BP | GO:0008272 | sulfate transport | IEP | Predicted GO |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | Predicted GO |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015116 | sulfate transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Predicted GO |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Predicted GO |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015698 | inorganic anion transport | IEP | Predicted GO |
| CC | GO:0016021 | integral component of membrane | IEP | Predicted GO |
| MF | GO:0016160 | amylase activity | IEP | Predicted GO |
| MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Predicted GO |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0022900 | electron transport chain | IEP | Predicted GO |
| BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Predicted GO |
| CC | GO:0044425 | membrane part | IEP | Predicted GO |
| BP | GO:0051179 | localization | IEP | Predicted GO |
| BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Predicted GO |
| BP | GO:0072348 | sulfur compound transport | IEP | Predicted GO |
| MF | GO:1901682 | sulfur compound transmembrane transporter activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008802 | REF | 31 | 234 |
| No external refs found! |