Bradi2g36897


Description : ATP binding cassette subfamily B4


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g36897
Cluster HCCA clusters: Cluster_137

GO:0004553
Target Alias Description ECC score Gene Family Method Actions
A4A49_02254 No alias abc transporter b family member 11 0.03 Orthogroups_2024-Update
At1g10680 No alias ABC transporter B family member 10... 0.02 Orthogroups_2024-Update
Bradi2g17720 No alias P-glycoprotein 11 0.04 Orthogroups_2024-Update
Bradi2g47400 No alias ATP binding cassette subfamily B4 0.05 Orthogroups_2024-Update
Brara.D02827.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
GRMZM2G333183 No alias ATP binding cassette subfamily B1 0.03 Orthogroups_2024-Update
Glyma.01G016500 No alias P-glycoprotein 2 0.02 Orthogroups_2024-Update
Glyma.17G041300 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Glyma.19G016700 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
LOC_Os05g04610 No alias ABC transporter, ATP-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp2g11920.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
PSME_00011041-RA No alias (at4g25960 : 1546.0) P-glycoprotein 2 (PGP2); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00023263-RA No alias (q6yuu5|mdr_orysa : 1044.0) Putative multidrug... 0.03 Orthogroups_2024-Update
PSME_00023264-RA No alias (q6yuu5|mdr_orysa : 1318.0) Putative multidrug... 0.03 Orthogroups_2024-Update
PSME_00031136-RA No alias (at1g02520 : 633.0) P-glycoprotein 11 (PGP11); FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00035518-RA No alias (at2g39480 : 1505.0) P-glycoprotein 6 (PGP6); FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00039058-RA No alias (q6yuu5|mdr_orysa : 1225.0) Putative multidrug... 0.02 Orthogroups_2024-Update
Potri.001G139700 No alias P-glycoprotein 2 0.03 Orthogroups_2024-Update
Potri.002G019600 No alias P-glycoprotein 13 0.03 Orthogroups_2024-Update
Potri.003G094400 No alias P-glycoprotein 2 0.03 Orthogroups_2024-Update
Potri.010G210100 No alias P-glycoprotein 20 0.03 Orthogroups_2024-Update
Sopen02g032160 No alias ABC transporter transmembrane region 0.04 Orthogroups_2024-Update
Sopen06g004030 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 395 542
IPR011527 ABC1_TM_dom 705 977
IPR011527 ABC1_TM_dom 51 326
IPR003439 ABC_transporter-like 1047 1195
No external refs found!