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  5. Bradi2g37327

Bradi2g37327


Description : histone H2A 12


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g37327
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
At4g27230 No alias Probable histone H2A.3 [Source:UniProtKB/Swiss-Prot;Acc:O81826] 0.02 Orthogroups_2024-Update
HORVU0Hr1G013190.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU5Hr1G069690.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
HORVU6Hr1G006120.2 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU6Hr1G021250.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU7Hr1G100100.3 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
HORVU7Hr1G100110.4 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Seita.2G343400.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
Seita.3G347600.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 21 98
IPR032454 Histone_H2A_C 101 134
No external refs found!