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  5. Bradi2g38030

Bradi2g38030


Description : DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain


Gene families : OG_42_0001670 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g38030
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
At5g60410 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.09 Orthogroups_2024-Update
Cre12.g500900 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.02 Orthogroups_2024-Update
Glyma.11G154005 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.04 Orthogroups_2024-Update
Glyma.12G071300 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.03 Orthogroups_2024-Update
Glyma.13G328100 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.02 Orthogroups_2024-Update
HORVU1Hr1G013600.3 No alias E3 SUMO ubiquitin ligase *(SIZ1) 0.04 Orthogroups_2024-Update
HORVU3Hr1G117840.7 No alias E3 SUMO ubiquitin ligase *(SIZ1) 0.03 Orthogroups_2024-Update
MA_10436942g0020 No alias (at5g60410 : 372.0) Encodes a plant small... 0.04 Orthogroups_2024-Update
Mp6g08590.1 No alias SUMO E3 ligase (SIZ1) 0.02 Orthogroups_2024-Update
Potri.004G210200 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.02 Orthogroups_2024-Update
Potri.008G042300 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.02 Orthogroups_2024-Update
Potri.009G015000 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.03 Orthogroups_2024-Update
Pp1s16_412V6 No alias MUF9.5; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.3G046500.1 No alias E3 SUMO ubiquitin ligase *(SIZ1) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
MF GO:0008193 tRNA guanylyltransferase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004181 Znf_MIZ 363 411
IPR019787 Znf_PHD-finger 117 170
IPR003034 SAP_dom 15 43
No external refs found!