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  5. Bradi2g38695

Bradi2g38695


Description : MADS-box transcription factor family protein


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g38695
Cluster HCCA clusters: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
A4A49_19521 No alias developmental protein sepallata 1 0.02 Orthogroups_2024-Update
A4A49_22632 No alias floral homeotic protein agamous 0.03 Orthogroups_2024-Update
At1g22130 No alias Agamous-like MADS-box protein AGL104... 0.02 Orthogroups_2024-Update
At4g22950 No alias Agamous-like MADS-box protein AGL19... 0.03 Orthogroups_2024-Update
Bradi1g59250 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.E02241.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I03027.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.K00360.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.05G050700 No alias AGAMOUS-like 19 0.02 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.01 Orthogroups_2024-Update
Glyma.09G266400 No alias AGAMOUS-like 6 0.03 Orthogroups_2024-Update
Glyma.09G283800 No alias K-box region and MADS-box transcription factor family protein 0.06 Orthogroups_2024-Update
Glyma.10G084700 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
Glyma.10G085600 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
Glyma.11G252300 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.13G034100 No alias K-box region and MADS-box transcription factor family protein 0.05 Orthogroups_2024-Update
Glyma.13G255200 No alias AGAMOUS-like 21 0.02 Orthogroups_2024-Update
Glyma.17G081200 No alias AGAMOUS-like 8 0.02 Orthogroups_2024-Update
Glyma.19G047600 No alias MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.20G136700 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
HORVU0Hr1G003020.3 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.05 Orthogroups_2024-Update
LOC_Os06g06750 No alias OsMADS5 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g41960 No alias OsMADS37 - MADS-box family gene with MIKC* type-box, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g39130 No alias OsMADS56 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
MA_458668g0010 No alias (at2g45660 : 100.0) Controls flowering and is required... 0.02 Orthogroups_2024-Update
Potri.004G130900 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Potri.004G131100 No alias AGAMOUS-like 29 0.03 Orthogroups_2024-Update
Pp1s209_130V6 No alias mads-box transcription factor 0.01 Orthogroups_2024-Update
Seita.3G280400.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G194800.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G192900.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Sopen03g033910 No alias K-box region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 19 65
No external refs found!