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  5. Bradi2g39230

Bradi2g39230


Description : ERD (early-responsive to dehydration stress) family protein


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g39230
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Brara.C02721.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Brara.F00887.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Glyma.07G263300 No alias ERD (early-responsive to dehydration stress) family protein 0.04 Orthogroups_2024-Update
Glyma.09G211000 No alias early-responsive to dehydration stress protein (ERD4) 0.03 Orthogroups_2024-Update
Glyma.13G002200 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Orthogroups_2024-Update
Kfl00551_0030 kfl00551_0030_v1.1 (at1g30360 : 436.0) early-responsive to dehydration 4... 0.02 Orthogroups_2024-Update
MA_10431698g0010 No alias (at1g30360 : 669.0) early-responsive to dehydration 4... 0.02 Orthogroups_2024-Update
Mp5g05890.1 No alias calcium-permeable channel (OSCA) 0.02 Orthogroups_2024-Update
Pp1s86_71V6 No alias early responsive to dehydration protein 0.02 Orthogroups_2024-Update
Seita.3G403000.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Sopen02g025700 No alias Domain of unknown function DUF221 0.02 Orthogroups_2024-Update
Sopen12g030230 No alias Domain of unknown function DUF221 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032880 Csc1_N 7 176
IPR003864 RSN1_7TM 369 641
IPR027815 PHM7_cyt 197 358
No external refs found!